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Menin inhibition impairs metastatic colonization of Ewing sarcoma
Katherine A. Braun, Nicolas M. Garcia, Mohamed A. Ahmed, Darleen S. Tu, Stephanie I. Walter, Emma D. Wrenn, Megan E.B. Dean, Neerja Katiyar, Elizabeth R. Lawlor
Katherine A. Braun, Nicolas M. Garcia, Mohamed A. Ahmed, Darleen S. Tu, Stephanie I. Walter, Emma D. Wrenn, Megan E.B. Dean, Neerja Katiyar, Elizabeth R. Lawlor
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Research Article Cell biology Oncology

Menin inhibition impairs metastatic colonization of Ewing sarcoma

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Abstract

Menin is a scaffolding protein that interacts with context-specific partners to regulate gene expression. In rearranged mixed-lineage leukemia, Menin-MLL interactions drive leukemogenesis and Menin inhibitors have been FDA approved for these cancers. We previously reported that Menin promotes oncogenic phenotypes in Ewing sarcoma (EwS). Here, we sought to define EwS-specific functions of Menin and determine if Menin inhibitors could be therapeutically leveraged for these tumors. Genetic KO of Menin had no effect on EwS cell proliferation in vitro, but metastatic potential of Menin-depleted cells in vivo was impaired. Transcriptional profiling of Menin-KO cells in vitro showed reproducible downregulation of MYC signature genes and upregulation of developmental programs. Conversely, transcriptional rewiring of developmental genes and restoration of MYC target gene expression were evident in tumors that arose from Menin-KO cells. Exposing EwS cells to the Menin inhibitor VTP50469 (revumenib) inhibited expression of MYC targets, and coimmunoprecipitation studies detected Menin-MYC interactions that were partially disrupted by the drug. Metastatic colonization of disseminated EwS cells in vivo was significantly inhibited in mice fed VTP50469 chow. Together these findings implicate Menin as a mediator of EwS metastasis and suggest that Menin inhibitors warrant investigation as novel therapeutics for patients with high-risk disease.

Authors

Katherine A. Braun, Nicolas M. Garcia, Mohamed A. Ahmed, Darleen S. Tu, Stephanie I. Walter, Emma D. Wrenn, Megan E.B. Dean, Neerja Katiyar, Elizabeth R. Lawlor

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Figure 2

MEN1-KO EwS cells have altered expression of proliferation and differentiation programs.

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MEN1-KO EwS cells have altered expression of proliferation and different...
(A and B) Overlap of downregulated (A) and upregulated (B) genes in A673 and TC32 MEN1-KO cells. Significant genes in each model were defined as Padj < 0.05 as described in Methods. The statistical significance of the overlap in the Venn diagrams was calculated using a Fisher’s exact test. (C and D) The top 10 enriched Hallmark pathways and the top 5 enriched GO-BP pathways among overlapping downregulated (C) and upregulated (D) genes as determined by Enrichr. The number of overlapping/total genes is shown for each pathway. (E) Invasion of control and MEN1-KO cells embedded in rat tail collagen for 5 days. Representative phase and phalloidin (red)/DAPI (blue) stained images are shown. Scale bars: 100 μm. (F) Invasion in collagen was quantified and compared between control and MEN1-KO cells using spheroid circularity, as described in Methods. Statistical comparisons were performed using a Welch’s t test with a 2-tailed P value at 95% CI.

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