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Dietary indoles influence the AHR-RORγt axis and mucosal immune homeostasis in ART-treated SIV infection
Siva Thirugnanam, Alison R. Van Zandt, Alexandra B. McNally, Victoria A. Hart, Isabelle Berthelot, Cecily C. Midkiff, Lara A. Doyle-Meyers, David A. Welsh, Robert V. Blair, Andrew G. MacLean, Namita Rout
Siva Thirugnanam, Alison R. Van Zandt, Alexandra B. McNally, Victoria A. Hart, Isabelle Berthelot, Cecily C. Midkiff, Lara A. Doyle-Meyers, David A. Welsh, Robert V. Blair, Andrew G. MacLean, Namita Rout
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Research Article AIDS/HIV Immunology Inflammation

Dietary indoles influence the AHR-RORγt axis and mucosal immune homeostasis in ART-treated SIV infection

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Abstract

HIV infection rapidly impairs the gastrointestinal barrier, contributing to persistent mucosal immune dysfunction, microbial translocation, and systemic inflammation despite antiretroviral therapy (ART). Using SIV-infected rhesus macaques on long-term ART, we investigated mechanisms underlying impairment in gut barrier–protective IL-17/IL-22 responses and the potential modulation of this pathway by dietary indoles. Longitudinal profiling of colonic epithelial and lamina propria cells revealed a selective loss of IL-17/IL-22–producing γδ T cells and type 3 innate lymphoid cells (ILC3s). This loss correlated with reduced expression of the transcription factors AHR and RORγt and was associated with elevated plasma markers of intestinal epithelial barrier disruption (IEBD), including intestinal fatty acid–binding protein (iFABP), zonulin, and LPS-binding protein (LBP). Targeting this transcriptional deficiency, dietary indole supplementation for 1 month restored colonic AHR+ IL-22–producing γδ T cells, RORγt+ ILC3s, and Vδ1 T cells, and was associated with reduced iFABP and zonulin levels. Immunohistochemical analyses further demonstrated enrichment of AHR/RORγt-coexpressing cells in the colon of indole-supplemented animals during chronic SIV infection on ART. Collectively, these findings indicate that disruption of the AHR-RORγt axis is a key pathogenic mechanism underlying persistent IEBD in chronic SIV/HIV infection. Modulation of AHR and RORγt signaling pathways in the gut may therefore represent a promising therapeutic strategy to reinforce mucosal barrier function and mitigate chronic inflammation in people living with HIV.

Authors

Siva Thirugnanam, Alison R. Van Zandt, Alexandra B. McNally, Victoria A. Hart, Isabelle Berthelot, Cecily C. Midkiff, Lara A. Doyle-Meyers, David A. Welsh, Robert V. Blair, Andrew G. MacLean, Namita Rout

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Figure 5

Cytokine production by colonic mucosal T cells and ILC3s during ART-suppressed SIV infection and association with lineage-defining transcription factors.

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Cytokine production by colonic mucosal T cells and ILC3s during ART-supp...
Freshly isolated colonic LPLs were evaluated for cytokine production following ex vivo stimulation with PMA/calcium-ionomycin. (A–C) Intracellular expression of IL-22 (A), IL-17A (B), and IFN-γ (C) across γδ T cells, CD4+ T cells, CD8+ T cells, and ILC3s. Lines connect longitudinal samples from the same animal to illustrate shifts from pre-SIV baseline to ART-suppressed SIV infection. (D–F) Transcription factor correlations: correlation analysis between master regulators and cytokine output in colonic T cells and ILC3s. Transcription factor expression was measured in parallel and correlated with cytokine production. Correlations between RORγt (D) and AHR (E) expression and IL-17A or IL-22 production by colonic γδ T cell subsets are shown. Correlations between T-bet (F) and IFN-γ, IL-17A, or IL-22 production by colonic γδ T cells and ILC3s are presented. Spearman’s rank correlations were calculated using pooled samples from baseline and 30 days after infection to assess maintenance of these relationships during SIV-associated immune activation. For A–C, data represent mean ± SEM, with P values determined by Wilcoxon’s paired signed-rank test. For D–F, Spearman’s rank correlations were calculated using pooled longitudinal data to define the relationship between transcription factors and cytokines across healthy and SIV-associated immune activation.

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