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Dietary indoles influence the AHR-RORγt axis and mucosal immune homeostasis in ART-treated SIV infection
Siva Thirugnanam, Alison R. Van Zandt, Alexandra B. McNally, Victoria A. Hart, Isabelle Berthelot, Cecily C. Midkiff, Lara A. Doyle-Meyers, David A. Welsh, Robert V. Blair, Andrew G. MacLean, Namita Rout
Siva Thirugnanam, Alison R. Van Zandt, Alexandra B. McNally, Victoria A. Hart, Isabelle Berthelot, Cecily C. Midkiff, Lara A. Doyle-Meyers, David A. Welsh, Robert V. Blair, Andrew G. MacLean, Namita Rout
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Research Article AIDS/HIV Immunology Inflammation

Dietary indoles influence the AHR-RORγt axis and mucosal immune homeostasis in ART-treated SIV infection

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Abstract

HIV infection rapidly impairs the gastrointestinal barrier, contributing to persistent mucosal immune dysfunction, microbial translocation, and systemic inflammation despite antiretroviral therapy (ART). Using SIV-infected rhesus macaques on long-term ART, we investigated mechanisms underlying impairment in gut barrier–protective IL-17/IL-22 responses and the potential modulation of this pathway by dietary indoles. Longitudinal profiling of colonic epithelial and lamina propria cells revealed a selective loss of IL-17/IL-22–producing γδ T cells and type 3 innate lymphoid cells (ILC3s). This loss correlated with reduced expression of the transcription factors AHR and RORγt and was associated with elevated plasma markers of intestinal epithelial barrier disruption (IEBD), including intestinal fatty acid–binding protein (iFABP), zonulin, and LPS-binding protein (LBP). Targeting this transcriptional deficiency, dietary indole supplementation for 1 month restored colonic AHR+ IL-22–producing γδ T cells, RORγt+ ILC3s, and Vδ1 T cells, and was associated with reduced iFABP and zonulin levels. Immunohistochemical analyses further demonstrated enrichment of AHR/RORγt-coexpressing cells in the colon of indole-supplemented animals during chronic SIV infection on ART. Collectively, these findings indicate that disruption of the AHR-RORγt axis is a key pathogenic mechanism underlying persistent IEBD in chronic SIV/HIV infection. Modulation of AHR and RORγt signaling pathways in the gut may therefore represent a promising therapeutic strategy to reinforce mucosal barrier function and mitigate chronic inflammation in people living with HIV.

Authors

Siva Thirugnanam, Alison R. Van Zandt, Alexandra B. McNally, Victoria A. Hart, Isabelle Berthelot, Cecily C. Midkiff, Lara A. Doyle-Meyers, David A. Welsh, Robert V. Blair, Andrew G. MacLean, Namita Rout

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Figure 4

Frequencies of colonic mucosal γδ T cells and ILC3s and expression of Th1/Th17-associated transcription factors during acute SIV infection and ART.

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Frequencies of colonic mucosal γδ T cells and ILC3s and expression of Th...
(A) Longitudinal frequencies of CD4+ T, CD8+ T, Vδ1 T, Vδ2 T, and ILC3 populations in the LPLs from colon biopsies at indicated time points using the gating strategy described in Figure 2A. (B) AHR, RORγt, and T-bet expression by colonic LPL Vδ1 T, Vδ2 T, and ILC3 populations. (C) Pie charts depicting the relative expression of AHR, RORγt, and T-bet by Vδ1 T, Vδ2 T, and ILC3 populations in colonic LPLs isolated from pre-SIV baseline through SIV infection and ART. (D) Longitudinal frequencies of CD4+ T, CD8+ T, Vδ1 T, Vδ2 T, and ILC3 populations in colonic IELs at indicated time points. (E) AHR, RORγt, and T-bet expression by colonic IEL Vδ1 T, Vδ2 T, and ILC3 populations. (F) Pie charts depicting the relative expression of AHR, RORγt, and T-bet by Vδ1 T, Vδ2 T, and ILC3 populations in colonic IEL fraction from pre-SIV baseline through SIV infection and ART. Pie arcs represent expression of individual transcription factors, and pie slices represent the number of coexpressed transcription factors. Note that IEL data represent n = 5–6 animals because of insufficient cell yields from cryopreserved colon biopsies for these specific assays. The rare frequencies of IEL Vδ2 T and ILC3 populations precluded a meaningful analysis of their combinatorial transcription factor profiles at the post-ART time point. Data are shown as mean ± SEM and paired ANOVA test P values.

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