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Transcriptional analysis of primary ciliary dyskinesia airway cells reveals a dedicated cilia glutathione pathway
Jeffrey R. Koenitzer, Deepesh Kumar Gupta, Wang Kyaw Twan, Huihui Xu, Nicholas Hadas, Finn J. Hawkins, Mary Lou Beermann, Gervette M. Penny, Nathan T. Wamsley, Andrew Berical, Michael B. Major, Susan K. Dutcher, Steven L. Brody, Amjad Horani
Jeffrey R. Koenitzer, Deepesh Kumar Gupta, Wang Kyaw Twan, Huihui Xu, Nicholas Hadas, Finn J. Hawkins, Mary Lou Beermann, Gervette M. Penny, Nathan T. Wamsley, Andrew Berical, Michael B. Major, Susan K. Dutcher, Steven L. Brody, Amjad Horani
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Research Article Cell biology Pulmonology

Transcriptional analysis of primary ciliary dyskinesia airway cells reveals a dedicated cilia glutathione pathway

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Abstract

Primary ciliary dyskinesia (PCD) is a genetic condition that results in dysmotile cilia. The repercussions of cilia dysmotility and gene variants on the multiciliated cell remain poorly understood. We used single-cell RNA-Seq, proteomics, and advanced microscopy to compare primary culture epithelial cells from patients with PCD, their heterozygous mothers, and healthy individuals, and we induced pluripotent stem cells (iPScs) generated from a patient with PCD. Transcriptomic analysis revealed unique signatures in PCD airway cells compared with their mothers’ cells and the cells of healthy individuals. Gene expression in heterozygous mothers’ cells diverged from both control and PCD cells, marked by increased inflammatory and cellular stress signatures. Primary and iPS-derived PCD multiciliated cells had increased expression of glutathione-S-transferases GSTA2 and GSTA1, as well as NRF2 target genes, accompanied by elevated levels of reactive oxygen species (ROS). Immunogold labeling in human cilia and proteomic analysis of the ciliated organism Chlamydomonas reinhardtii demonstrated that GSTA2 localizes to motile cilia. Loss of human GSTA2 and C. reinhardtii GSTA resulted in slowed cilia motility, pointing to local cilia regulatory roles. Our findings identify cellular responses unique to PCD variants and independent of environmental stress and uncover a dedicated ciliary GSTA2 pathway essential for normal motility that may be a therapeutic target.

Authors

Jeffrey R. Koenitzer, Deepesh Kumar Gupta, Wang Kyaw Twan, Huihui Xu, Nicholas Hadas, Finn J. Hawkins, Mary Lou Beermann, Gervette M. Penny, Nathan T. Wamsley, Andrew Berical, Michael B. Major, Susan K. Dutcher, Steven L. Brody, Amjad Horani

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Figure 7

Motile cilia dedicated glutathione pathway.

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Motile cilia dedicated glutathione pathway.
(A) Immunofluorescent staini...
(A) Immunofluorescent staining of GSTA2 localization to motile cilia of airway cells. (B) Immunofluorescent detection of cytoplasmic GSTA1 in the cytoplasm of multiciliated cells. (C) Immunodetection of glutathione in cilia and cytoplasm of multiciliated cells. (D) Levels of GSTA2 and FOXJ1 during the differentiation of basal cells (ALI day 0) to multiciliated cells, detected by RT-qPCR (n = 3 replicates, error bars represent standard error). (E) Immunoblot detection of GSTA1 and GSTA2 compared with acetylated α-tubulin (ac-TUB) used as a cilia marker during airway epithelial cell differentiation. (F) Immunogold labeling of multiciliated airway cells showing GSTA2 along the cilia axoneme and basal-body microtubules. (G) Scanning electron microscopy of multiciliated cells treated with butter to demembranate cilia showing GSTA2 along the cilia microtubules as well as on the ciliary membrane. (H) CBF and (I) displacement of microbeads across the apical surface of culture primary airway cells following transduction of GSTA2 shRNA. (J) Superoxide levels in multiciliated cells detected by MitoSox. (K) MFI of ciliary axonemes showing increased labeling of GSTA2 in PCD and iPS PCD cells compared with control cells (n = 3 replicates each). (L) MFI of ciliary axonemes showing increased labeling of GSTA2 in CCDC39 and RSPH1 PCD cells compared to control cells, and no increase in DNAAF5 and SPAG1 PCD cells. In A–L, n = 3 replicates each. Representative images are shown. **P < 0.01, ****P < 0.0001. Error bars represent SD unless noted otherwise. Scale bars = 10μM.

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