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Prdm6 controls heart development by regulating neural crest cell differentiation and migration
Lingjuan Hong, Na Li, Victor Gasque, Sameet Mehta, Lupeng Ye, Yinyu Wu, Jinyu Li, Andreas Gewies, Jürgen Ruland, Karen K. Hirschi, Anne Eichmann, Caroline Hendry, David van Dijk, Arya Mani
Lingjuan Hong, Na Li, Victor Gasque, Sameet Mehta, Lupeng Ye, Yinyu Wu, Jinyu Li, Andreas Gewies, Jürgen Ruland, Karen K. Hirschi, Anne Eichmann, Caroline Hendry, David van Dijk, Arya Mani
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Research Article Cardiology Development

Prdm6 controls heart development by regulating neural crest cell differentiation and migration

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Abstract

The molecular mechanisms that drive the acquisition of distinct neural crest cell (NCC) fates is still poorly understood. Here, we identified Prdm6 as an epigenetic modifier that temporally and spatially regulates the expression of NCC specifiers and determines the fate of a subset of migrating cardiac NCCs (CNCCs). Using transcriptomic analysis and genetic and fate mapping approaches in transgenic mice, we showed that disruption of Prdm6 was associated with impaired CNCC differentiation, delamination, and migration and led to patent ductus arteriosus (DA) and ventricular noncompaction. Bulk and single-cell RNA-Seq analyses of the DA and CNCCs identified Prdm6 as a regulator of a network of CNCC specification genes, including Wnt1, Tfap2b, and Sox9. Loss of Prdm6 in CNCCs diminished its expression in the pre-epithelial–mesenchymal transition (pre-EMT) cluster, resulting in the retention of NCCs in the dorsal neural tube. This defect was associated with diminished H4K20 monomethylation and G1-S progression and augmented Wnt1 transcript levels in pre-EMT and neural tube clusters, which we showed was the major driver of the impaired CNCC migration. Altogether, these findings revealed Prdm6 as a key regulator of CNCC differentiation and migration and identified Prdm6 and its regulated network as potential targets for the treatment of congenital heart diseases.

Authors

Lingjuan Hong, Na Li, Victor Gasque, Sameet Mehta, Lupeng Ye, Yinyu Wu, Jinyu Li, Andreas Gewies, Jürgen Ruland, Karen K. Hirschi, Anne Eichmann, Caroline Hendry, David van Dijk, Arya Mani

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Figure 5

Smooth muscle–specific disruption of Prdm6 in mice alters transcript levels of contractile proteins and neural crest specifiers and causes patent ductus arteriosus.

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Smooth muscle–specific disruption of Prdm6 in mice alters transcript lev...
(A) The heart and great cardiac vessels in control (left) and Prdm6fl/fl SM22-Cre pups at P0.5 (right); aorta is shown by white arrowheads and the closed DA or patent DA by black arrowheads. Scale bar: 200 μm. (B) The confocal images of representative cross-sections of the aorta and DA of control (left) and Prdm6fl/fl SM22-Cre (right) P0.5 pups, immunostained for αSMA (red), histone3 (green), and DAPI (blue). Scale bar: 100 μm. (C) The confocal images of representative cross-sections of DA of control (top) and Prdm6fl/fl SM22-Cre embryos (bottom) at E17.5 immunostained for Ki67 (red) and costained with antibodies against αSMA (green), CD31 (gray), and DAPI (blue). Scale bar: 50 μm. (D) Quantification of Ki67-positive cells in the smooth muscle cell layer. (E) Volcano plot of bulk RNA-Seq data of Prdm6fl/fl SM22-Cre mice DA compared with control mice at E17.5. The log fold change and the log P values are shown on x and y axes, respectively. The comparison between different groups was done by a 2-tailed unpaired t test, and data are shown as mean ± SEM. The significantly changed transcripts in Prdm6fl/fl SM22-Cre versus control mice are shown in red and the locations of specific genes of interest are shown. The significantly altered transcripts were determined using the following thresholds: adjusted P < 0.05, unpaired t test, FDR < 0.05, Benjamini-Hochberg corrected. All controls were the corresponding littermates (n = 4 per group).

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