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Mitochondrial dysfunction–induced H3K27 hyperacetylation perturbs enhancers in Parkinson’s disease
Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy
Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy
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Research Article Neuroscience

Mitochondrial dysfunction–induced H3K27 hyperacetylation perturbs enhancers in Parkinson’s disease

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Abstract

Mitochondrial dysfunction is a major pathophysiological contributor to the progression of Parkinson’s disease (PD); however, whether it contributes to epigenetic dysregulation remains unknown. Here, we show that both chemically and genetically driven mitochondrial dysfunctions share a common mechanism of epigenetic dysregulation. Under both scenarios, lysine 27 acetylation of likely variant H3.3 (H3.3K27ac) increased in dopaminergic neuronal models of PD, thereby opening that region to active enhancer activity via H3K27ac. These vulnerable epigenomic loci represent potential transcription factor motifs for PD pathogenesis. We further confirmed that mitochondrial dysfunction induces H3K27ac in ex vivo and in vivo (MitoPark) neurodegenerative models of PD. Notably, the significantly increased H3K27ac in postmortem PD brains highlights the clinical relevance to the human PD population. Our results reveal an exciting mitochondrial dysfunction-metabolism-H3K27ac-transcriptome axis for PD pathogenesis. Collectively, the mechanistic insights link mitochondrial dysfunction to epigenetic dysregulation in dopaminergic degeneration and offer potential new epigenetic intervention strategies for PD.

Authors

Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy

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Figure 4

Identification of vulnerable genomic loci binding with H3K27ac in rotenone-treated and TFAM-KO N27 cells.

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Identification of vulnerable genomic loci binding with H3K27ac in roteno...
(A) Bar chart indicating the similar genomic distribution of H3K27ac sites in 2 models after intragroup normalization. (B) Scatter plots showing H3K27ac peaks located at gene promoter regions in rotenone-treated and TFAM-KO N27 neurons when compared with their respective control. (C) Scatter plots showing H3K27ac peaks located at enhancer regions in rotenone-treated and TFAM-KO N27 neurons when compared with their respective control. Each point represents a peak and most points cluster in the middle. The dots indicate upregulated (red) and downregulated (blue) H3K27ac peaks. (D) Bar plot showing the proportion of differentially expressed genes (DEGs) with a consistent change in H3K27ac enrichment in both models. (E) Pie charts indicating the genomic features of those altered H3K27ac peaks in both models.

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ISSN 2379-3708

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