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Mitochondrial dysfunction–induced H3K27 hyperacetylation perturbs enhancers in Parkinson’s disease
Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy
Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy
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Research Article Neuroscience

Mitochondrial dysfunction–induced H3K27 hyperacetylation perturbs enhancers in Parkinson’s disease

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Abstract

Mitochondrial dysfunction is a major pathophysiological contributor to the progression of Parkinson’s disease (PD); however, whether it contributes to epigenetic dysregulation remains unknown. Here, we show that both chemically and genetically driven mitochondrial dysfunctions share a common mechanism of epigenetic dysregulation. Under both scenarios, lysine 27 acetylation of likely variant H3.3 (H3.3K27ac) increased in dopaminergic neuronal models of PD, thereby opening that region to active enhancer activity via H3K27ac. These vulnerable epigenomic loci represent potential transcription factor motifs for PD pathogenesis. We further confirmed that mitochondrial dysfunction induces H3K27ac in ex vivo and in vivo (MitoPark) neurodegenerative models of PD. Notably, the significantly increased H3K27ac in postmortem PD brains highlights the clinical relevance to the human PD population. Our results reveal an exciting mitochondrial dysfunction-metabolism-H3K27ac-transcriptome axis for PD pathogenesis. Collectively, the mechanistic insights link mitochondrial dysfunction to epigenetic dysregulation in dopaminergic degeneration and offer potential new epigenetic intervention strategies for PD.

Authors

Minhong Huang, Dan Lou, Adhithiya Charli, Dehui Kong, Huajun Jin, Gary Zenitsky, Vellareddy Anantharam, Arthi Kanthasamy, Zhibin Wang, Anumantha G. Kanthasamy

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Figure 1

H3K27ac functions as the key acetylation site and responds to mitochondrial dysfunction in both rotenone-exposed and TFAM-KO DAergic neuronal cell models of Parkinson’s disease.

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H3K27ac functions as the key acetylation site and responds to mitochondr...
(A) Representative immunoblot and (B) quantification for H3K27ac from rotenone (Rot)-treated N27 cells. Mann-Whitney test (n = 4–6). (C) Representative immunoblots for H3K27ac and (D) quantification from TFAM-KO N27 cells. Unpaired Student’s t test followed by Welch’s correction (n = 8). In Western blots, 5 T175 flasks of cells were harvested for each sample. (E) ICC for H3K27ac and (F) H3K36ac from rotenone-treated and TFAM-KO N27 cells, with the nucleus stained with Hoechst (blue) and actin filaments with phalloidin (green). Independent experiments were repeated at least 4 times. Scale bar: 50 μm. (G) 3D surface plot analysis of H3K27ac and H3K36ac in rotenone-treated and TFAM-KO N27s. (H) Keyence BZ-X800 analysis of fluorescence intensity of H3K27ac and H3K36ac showing mean ± SEM; 1-way ANOVA followed by Tukey’s post hoc test. Ctrl, control; NS, not significant. *P ≤ 0.05; **P < 0.01; ***P < 0.001.

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