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Pharmacologic and genetic approaches define human pancreatic β cell mitogenic targets of DYRK1A inhibitors
Courtney Ackeifi, Ethan Swartz, Kunal Kumar, Hongtao Liu, Suebsuwong Chalada, Esra Karakose, Donald K. Scott, Adolfo Garcia-Ocaña, Roberto Sanchez, Robert J. DeVita, Andrew F. Stewart, Peng Wang
Courtney Ackeifi, Ethan Swartz, Kunal Kumar, Hongtao Liu, Suebsuwong Chalada, Esra Karakose, Donald K. Scott, Adolfo Garcia-Ocaña, Roberto Sanchez, Robert J. DeVita, Andrew F. Stewart, Peng Wang
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Research Article Endocrinology Metabolism

Pharmacologic and genetic approaches define human pancreatic β cell mitogenic targets of DYRK1A inhibitors

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Abstract

Small molecule inhibitors of dual specificity, tyrosine phosphorylation-regulated kinase 1A (DYRK1A), including harmine and others, are able to drive human β cell regeneration. While DYRK1A is certainly a target of this class, whether it is the only or the most important target is uncertain. Here, we employ a combined pharmacologic and genetic approach to refine the potential mitogenic targets of the DYRK1A inhibitor family in human islets. A combination of human β cell RNA sequencing, DYRK1A inhibitor kinome screens, pharmacologic inhibitors, and targeted silencing of candidate genes confirms that DYRK1A is a central target. Surprisingly, however, DYRK1B also proves to be an important target: silencing DYRK1A results in an increase in DYRK1B. Simultaneous silencing of both DYRK1A and DYRK1B yields greater β cell proliferation than silencing either individually. Importantly, other potential kinases, such as the CLK and the GSK3 families, are excluded as important harmine targets. Finally, we describe adenoviruses that are able to silence up to 7 targets simultaneously. Collectively, we report that inhibition of both DYRK1A and DYRK1B is required for induction of maximal rates of human β cell proliferation, and we provide clarity for future efforts in structure-based drug design for human β cell regenerative drugs.

Authors

Courtney Ackeifi, Ethan Swartz, Kunal Kumar, Hongtao Liu, Suebsuwong Chalada, Esra Karakose, Donald K. Scott, Adolfo Garcia-Ocaña, Roberto Sanchez, Robert J. DeVita, Andrew F. Stewart, Peng Wang

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Figure 1

A pharmacologic approach to defining human β cell mitogenic targets of the harmine analogue class.

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A pharmacologic approach to defining human β cell mitogenic targets of t...
This heatmap displays the most likely potential harmine targets derived from the kinome scans described in Table 1 and Supplemental Table 1 along the top row. Column 1 lists the kinase inhibitor drugs employed arranged in 2 clusters. The top group was selected because they are known inhibitors of DYRK1A. The drugs in the bottom group are not DYRK1A inhibitors, but they inhibit other kinases highlighted in the kinome screen in Table 1 and Supplemental Table 1. The color codes are indicated at the bottom of the heatmap. The sources of the data are shown in the references listed in the far right column; in some cases, these data are based in kinase inhibition assays, and in some cases, data are based on percent inhibition of binding in kinome screens, as indicated in the references listed. Taken together, the data make it clear that: (a) no DYRK1A inhibitor is entirely specific for any of the kinases shown, (b) all DYRK1A inhibitors are also DYRK1B inhibitors where data are available, and (c) it is impossible to precisely and unequivocally define relevant human β cell mitogenic targets for harmine, INDY, leucettine, 5-IT, and GNF4877 exclusively through the use of small molecule pharmacologic inhibitors (refs. 7–10, 12, 13, 26, 27, 30–36).

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