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Peripheral tissues reprogram CD8+ T cells for pathogenicity during graft-versus-host disease
Pedro Santos e Sousa, Séverine Ciré, Thomas Conlan, Laura Jardine, Claire Tkacz, Ivana R. Ferrer, Cara Lomas, Sophie Ward, Heather West, Simone Dertschnig, Sven Blobner, Terry K. Means, Stephen Henderson, Daniel H. Kaplan, Matthew Collin, Vincent Plagnol, Clare L. Bennett, Ronjon Chakraverty
Pedro Santos e Sousa, Séverine Ciré, Thomas Conlan, Laura Jardine, Claire Tkacz, Ivana R. Ferrer, Cara Lomas, Sophie Ward, Heather West, Simone Dertschnig, Sven Blobner, Terry K. Means, Stephen Henderson, Daniel H. Kaplan, Matthew Collin, Vincent Plagnol, Clare L. Bennett, Ronjon Chakraverty
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Research Article Immunology Transplantation

Peripheral tissues reprogram CD8+ T cells for pathogenicity during graft-versus-host disease

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Abstract

Graft-versus-host disease (GVHD) is a life-threatening complication of allogeneic stem cell transplantation induced by the influx of donor-derived effector T cells (TE) into peripheral tissues. Current treatment strategies rely on targeting systemic T cells; however, the precise location and nature of instructions that program TE to become pathogenic and trigger injury are unknown. We therefore used weighted gene coexpression network analysis to construct an unbiased spatial map of TE differentiation during the evolution of GVHD and identified wide variation in effector programs in mice and humans according to location. Idiosyncrasy of effector programming in affected organs did not result from variation in T cell receptor repertoire or the selection of optimally activated TE. Instead, TE were reprogrammed by tissue-autonomous mechanisms in target organs for site-specific proinflammatory functions that were highly divergent from those primed in lymph nodes. In the skin, we combined the correlation-based network with a module-based differential expression analysis and showed that Langerhans cells provided in situ instructions for a Notch-dependent T cell gene cluster critical for triggering local injury. Thus, the principal determinant of TE pathogenicity in GVHD is the final destination, highlighting the need for target organ–specific approaches to block immunopathology while avoiding global immune suppression.

Authors

Pedro Santos e Sousa, Séverine Ciré, Thomas Conlan, Laura Jardine, Claire Tkacz, Ivana R. Ferrer, Cara Lomas, Sophie Ward, Heather West, Simone Dertschnig, Sven Blobner, Terry K. Means, Stephen Henderson, Daniel H. Kaplan, Matthew Collin, Vincent Plagnol, Clare L. Bennett, Ronjon Chakraverty

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Figure 5

Notch signaling is a locale-specific regulator of TE functions within the epidermis.

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Notch signaling is a locale-specific regulator of TE functions within th...
(A) Cytoscape-generated visualization of the network connections among the 100 most connected genes in M28. Nodes represent the genes (circle area proportional to the intramodular connectivity, kME) and the color reflects the FDR q value of its correlation with the module; edges represent the topological overlap between genes (line thickness proportional to adjacency). Notch pathway–related genes and Notch downstream targets are highlighted. (B) Graph showing the ratio of enrichment (bars) and FDR q values (line) for pathways predicted by WebGestalt to regulate M28. (C) Effect of in vivo Notch signaling blockade upon alloreactive TE tissue infiltration and effector function. F→M BMT recipients were treated on days 5 and 6 with LY411575 or vehicle i.p. On day 7, IFN-γ synthesis by MataHari T cells in the spleen, IEL, and epidermis (left: representative flow cytometric plots; bottom right: summary data) and corresponding numbers of MataHari T cells isolated from each site (top right: summary data) were determined. Data derived from 3 independent experiments: LY411575 n = 7, vehicle n = 8 (all graphs showing mean ± SD). **P ≤ 0.01, ***P ≤ 0.001 by ANOVA with Holm-Sidak correction for multiple comparisons. (D) Graph showing module association with resistance to immunosuppressive therapies assessed by determining the overrepresentation of gene signature specific for a human MDR1+ Th1/Th17 subset that is resistant to glucocorticoids. Hypergeometric test. (E) Heatmap showing the relative enrichment for the MDR1+ Th1/Th17 gene signature in blood, dermis, and epidermis samples from GVHD patients as determined by single-sample GSEA. BMT, bone marrow transplantation; Epi, epidermis; FDR, false discovery rate; GSEA, gene set enrichment analysis; GVHD, graft-versus-host disease; IEL, intraepithelial lymphocyte; kME, intramodular connectivity; NES, normalized enrichment score; SLO, secondary lymphoid organ; TE, effector T cell; TO, target organ.

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