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Human alternative Klotho mRNA is a nonsense-mediated mRNA decay target inefficiently spliced in renal disease
Rik Mencke, Geert Harms, Jill Moser, Matijs van Meurs, Arjan Diepstra, Henri G. Leuvenink, Jan-Luuk Hillebrands
Rik Mencke, Geert Harms, Jill Moser, Matijs van Meurs, Arjan Diepstra, Henri G. Leuvenink, Jan-Luuk Hillebrands
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Research Article Aging Nephrology

Human alternative Klotho mRNA is a nonsense-mediated mRNA decay target inefficiently spliced in renal disease

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Abstract

Klotho is a renal protein involved in phosphate homeostasis, which is downregulated in renal disease. It has long been considered an antiaging factor. Two Klotho gene transcripts are thought to encode membrane-bound and secreted Klotho. Indeed, soluble Klotho is detectable in bodily fluids, but the relative contributions of Klotho secretion and of membrane-bound Klotho shedding are unknown. Recent advances in RNA surveillance reveal that premature termination codons, as present in alternative Klotho mRNA (for secreted Klotho), prime mRNAs for degradation by nonsense-mediated mRNA decay (NMD). Disruption of NMD led to accumulation of alternative Klotho mRNA, indicative of normally continuous degradation. RNA IP for NMD core factor UPF1 resulted in enrichment for alternative Klotho mRNA, which was also not associated with polysomes, indicating no active protein translation. Alternative Klotho mRNA transcripts colocalized with some P bodies, where NMD transcripts are degraded. Moreover, we could not detect secreted Klotho in vitro. These results suggest that soluble Klotho is likely cleaved membrane-bound Klotho only. Furthermore, we found that, especially in acute kidney injury, splicing of the 2 mRNA transcripts is dysregulated, which was recapitulated by various noxious stimuli in vitro. This likely constitutes a novel mechanism resulting in the downregulation of membrane-bound Klotho.

Authors

Rik Mencke, Geert Harms, Jill Moser, Matijs van Meurs, Arjan Diepstra, Henri G. Leuvenink, Jan-Luuk Hillebrands

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Figure 7

The relative abundance of the Klotho gene transcripts is dysregulated in vivo in renal disease.

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The relative abundance of the Klotho gene transcripts is dysregulated in...
(A) RT-PCR analysis of healthy renal cortices and acute kidney injury samples for both Klotho transcripts. (B) Densitometric quantification of renal cell carcinoma–adjacent (RCC-adjacent) healthy renal cortices (n = 12), donor kidney biopsies (n = 20), biopsies from kidneys afflicted with chronic kidney disease (CKD) (n = 28), and biopsies from kidneys suffering from acute kidney injury (AKI) (n = 18). (C) IHC for Klotho on kidneys with high alternative/membrane-bound Klotho mRNA ratios (n = 3) and kidneys with low alternative/membrane-bound Klotho mRNA ratios (n = 3) reveals lower Klotho protein expression in the kidneys with a relatively higher alternative Klotho mRNA abundance. Original magnifications: 200×. *P < 0.05, **P < 0.01, ***P < 0.001, as tested by Kruskal-Wallis test with Dunn’s post-hoc correction. Individual data points are plotted with mean ± SD.

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