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Device-free isolation of photoreceptor cells from patient iPSC-derived retinal organoids
Nicholas E. Stone, Laura R. Bohrer, Nathaniel K. Mullin, Alexander Berthold, Allison T. Wright, Ian C. Han, Edwin M. Stone, Robert F. Mullins, Budd A. Tucker
Nicholas E. Stone, Laura R. Bohrer, Nathaniel K. Mullin, Alexander Berthold, Allison T. Wright, Ian C. Han, Edwin M. Stone, Robert F. Mullins, Budd A. Tucker
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Research Article Ophthalmology Stem cells

Device-free isolation of photoreceptor cells from patient iPSC-derived retinal organoids

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Abstract

Autologous photoreceptor cell replacement is one of the most promising strategies currently being developed for the treatment of patients with inherited retinal degenerative blindness. Induced pluripotent stem cell–derived (iPSC-derived) retinal organoids, which faithfully recapitulate the structure of the neural retina, are an ideal source of transplantable photoreceptors required for these therapies. However, retinal organoids contain other retinal cell types, including bipolar, horizontal, and amacrine cells, which are unneeded and may reduce the potency of the final therapeutic product. Therefore, approaches for isolating fate-committed photoreceptor cells from dissociated retinal organoids are desirable. In this work, we present partial dissociation, a technique that leverages the high level of organization found in retinal organoids to enable selective enrichment of photoreceptor cells without the use of specialized equipment or reagents such as antibody labels. We demonstrate up to 90% photoreceptor cell purity by simply selecting cell fractions liberated from retinal organoids during enzymatic digestion in the absence of mechanical dissociation. Since the presented approach relies on the use of standard plasticware and commercially available current good manufacturing practice–compliant reagents, we believe that it is ideal for use in the preparation of clinical photoreceptor cell replacement therapies.

Authors

Nicholas E. Stone, Laura R. Bohrer, Nathaniel K. Mullin, Alexander Berthold, Allison T. Wright, Ian C. Han, Edwin M. Stone, Robert F. Mullins, Budd A. Tucker

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Figure 4

Partial dissociation of 2 patient lines.

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Partial dissociation of 2 patient lines.
(A and B) Characteristic struct...
(A and B) Characteristic structure of well-organized line 4 organoids (A) and poorly organized line 3 organoids (B). Scale bars: 500 μm (primary panel), 100 μm (insets). (C and D) Bar and UMAP plots showing the relative proportion and gene expression patterns of cells collected during control dissociations of each cell line. (E–L) Photoreceptor purity and dissociation rate as a function of dissociation time. Each row shows a representative organoid (E and I) along with the photoreceptor purity (F and J) (dashed line shows the photoreceptor purity of a control dissociation of the same cell line), cell recovery (G and K), and photoreceptor enrichment (H and L) (fold change relative to a control dissociation) for each fraction recovered during staged partial dissociation. Cell fractions were taken after 20, 40, and 60 minutes of total dissociation time, after which the remaining aggregates were fully dissociated via trituration (full) and collected. (M) UMAP plots for line 4 demonstrating proportion of each cell type present in each dissociation fraction. The 60-minute time point for the purity and enrichment plots of J and L are missing due to the library preparation failing for that sample. UMAP plots for all samples and time points are available in Supplemental Figure 2. Relative proportions of annotated cell types are available in Supplemental Table 5. Raw cell counts used to prepare recovery plots are available in Supplemental Table 6.

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