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Identification and validation of a T cell receptor targeting KRAS G12V in HLA-A*11:01 pancreatic cancer patients
Xiongfei Xu, Shiwei Guo, Haihui Gu, Zhanshan Cha, Xiaohan Shi, Xiaoyi Yin, Huan Wang, Suizhi Gao, Bo Li, Lingyu Zhu, Wei Jing, Kailian Zheng, Zhuo Shao, Peng Cheng, Chunhong Zheng, Yi-Ping Shih, Yunguang Li, Baohua Qian, Dong Gao, Eric Tran, Gang Jin
Xiongfei Xu, Shiwei Guo, Haihui Gu, Zhanshan Cha, Xiaohan Shi, Xiaoyi Yin, Huan Wang, Suizhi Gao, Bo Li, Lingyu Zhu, Wei Jing, Kailian Zheng, Zhuo Shao, Peng Cheng, Chunhong Zheng, Yi-Ping Shih, Yunguang Li, Baohua Qian, Dong Gao, Eric Tran, Gang Jin
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Research Article Immunology Oncology

Identification and validation of a T cell receptor targeting KRAS G12V in HLA-A*11:01 pancreatic cancer patients

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Abstract

T cells targeting a KRAS mutation can induce durable tumor regression in some patients with metastatic epithelial cancer. It is unknown whether T cells targeting mutant KRAS that are capable of killing tumor cells can be identified from peripheral blood of patients with pancreatic cancer. We developed an in vitro stimulation approach and identified HLA-A*11:01–restricted KRAS G12V–reactive CD8+ T cells and HLA-DRB1*15:01–restricted KRAS G12V–reactive CD4+ T cells from peripheral blood of 2 out of 6 HLA-A*11:01–positive patients with pancreatic cancer whose tumors expressed KRAS G12V. The HLA-A*11:01–restricted KRAS G12V–reactive T cell receptor (TCR) was isolated and validated to specifically recognize the KRAS G12V8–16 neoepitope. While T cells engineered to express this TCR specifically recognized all 5 tested human HLA-A*11:01+ and KRAS G12V+ pancreatic cancer organoids, the recognition was often modest, and tumor cell killing was observed in only 2 out of 5 organoids. IFN-γ priming of the organoids enhanced the recognition and killing by the TCR-engineered T cells. The TCR-engineered T cells could significantly slow the growth of an established organoid-derived xenograft in immunodeficient mice. Our data suggest that this TCR has potential for use in TCR-gene therapy, but additional strategies that enhance tumor recognition by the TCR-engineered T cells likely will be required to increase clinical activity.

Authors

Xiongfei Xu, Shiwei Guo, Haihui Gu, Zhanshan Cha, Xiaohan Shi, Xiaoyi Yin, Huan Wang, Suizhi Gao, Bo Li, Lingyu Zhu, Wei Jing, Kailian Zheng, Zhuo Shao, Peng Cheng, Chunhong Zheng, Yi-Ping Shih, Yunguang Li, Baohua Qian, Dong Gao, Eric Tran, Gang Jin

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Figure 1

Identification and functional analysis of HLA-A*11:01–restricted mutant KRAS G12V–reactive CD8+ T cells.

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Identification and functional analysis of HLA-A*11:01–restricted mutant ...
(A) Diagram of patient PBMC–derived potential KRAS G12V–reactive T cell (PBMC-T) culture. (B) PBMC-Ts from Pt.001 PBMCs from approximately 1 year after surgery were cocultured overnight with allogeneic HLA-A*11:01–expressing DCs (from Pt.007) pulsed with KRAS WT or G12V 24-mer peptides. The reactivity of T cells was tested by 4-1BB/OX-40 upregulation. Data are presented as mean ± SEM from 3 technical replicates. **P < 0.01 by 1-way ANOVA followed by Tukey’s multiple-comparison test. (C) Various T cells, including PBMC-T, expanded PBMC-T (PBMC-T expanded with autologous PBMCs), sorted tetramer+ CD8+ T cells, and sorted tetramer– CD8+ T cells (further expanded with irradiated feeder cells) were stained with KRAS G12V 9-mer–HLA-A*11:01 tetramer. The numbers in plots indicate the percentage of tetramer+ CD8+ T cells among CD8+ T cells. (D and E) Expanded tetramer+ CD8+ T cells were cocultured overnight with autologous DCs pulsed with 2 μg/mL KRAS WT or G12V 9-mer peptides. 4-1BB/OX-40 upregulation (D) and ELISPOT IFN-γ secretion (E) were assayed. The numbers in plots indicate the percentage of different subsets among tetramer+ CD8+ T cells. (F) Expanded tetramer+ CD8+ T cells were cocultured overnight with naturally HLA-A*11:01–expressing Panc-1 cells pulsed with various concentrations of KRAS WT or G12V 9-mer peptides. 4-1BB/OX-40 upregulation was assayed by flow cytometry.

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