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OGDH and Bcl-xL loss causes synthetic lethality in glioblastoma
Trang T.T. Nguyen, Consuelo Torrini, Enyuan Shang, Chang Shu, Jeong-Yeon Mun, Qiuqiang Gao, Nelson Humala, Hasan O. Akman, Guoan Zhang, Mike-Andrew Westhoff, Georg Karpel-Massler, Jeffrey N. Bruce, Peter Canoll, Markus D. Siegelin
Trang T.T. Nguyen, Consuelo Torrini, Enyuan Shang, Chang Shu, Jeong-Yeon Mun, Qiuqiang Gao, Nelson Humala, Hasan O. Akman, Guoan Zhang, Mike-Andrew Westhoff, Georg Karpel-Massler, Jeffrey N. Bruce, Peter Canoll, Markus D. Siegelin
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Research Article Oncology

OGDH and Bcl-xL loss causes synthetic lethality in glioblastoma

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Abstract

Glioblastoma (GBM) remains an incurable disease, requiring more effective therapies. Through interrogation of publicly available CRISPR and RNAi library screens, we identified the α-ketoglutarate dehydrogenase (OGDH) gene, which encodes an enzyme that is part of the tricarboxylic acid (TCA) cycle, as essential for GBM growth. Moreover, by combining transcriptome and metabolite screening analyses, we discovered that loss of function of OGDH by the clinically validated drug compound CPI-613 was synthetically lethal with Bcl-xL inhibition (genetically and through the clinically validated BH3 mimetic, ABT263) in patient-derived xenografts as well neurosphere GBM cultures. CPI-613–mediated energy deprivation drove an integrated stress response with an upregulation of the BH3-only domain protein, Noxa, in an ATF4-dependent manner, as demonstrated by genetic loss-of-function experiments. Consistently, silencing of Noxa attenuated cell death induced by CPI-613 in model systems of GBM. In patient-derived xenograft models of GBM in mice, the combination treatment of ABT263 and CPI-613 suppressed tumor growth and extended animal survival more potently than each compound on its own. Therefore, combined inhibition of Bcl-xL along with disruption of the TCA cycle might be a treatment strategy for GBM.

Authors

Trang T.T. Nguyen, Consuelo Torrini, Enyuan Shang, Chang Shu, Jeong-Yeon Mun, Qiuqiang Gao, Nelson Humala, Hasan O. Akman, Guoan Zhang, Mike-Andrew Westhoff, Georg Karpel-Massler, Jeffrey N. Bruce, Peter Canoll, Markus D. Siegelin

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Figure 2

Treatment with CPI-613 increases the expression of proapoptotic Noxa and suppresses Bcl-xL levels to induce apoptosis.

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Treatment with CPI-613 increases the expression of proapoptotic Noxa and...
(A) GBM22, KNS42, GBM43, NCH644, and GBM12 cells were treated with increasing concentrations of CPI-613 for 24 hours and were analyzed for the Bcl-2 family members by Western blotting. (B) GBM22 and KNS42 cells were transduced with an empty vector (EV) or a vector containing Bcl-xL cDNA (using adenoviruses), treated with increasing concentrations of CPI-613, and cellular viability was analyzed (n = 4 per group). FC, fold change. (C) GBM43 and KNS42 cells were transduced with an EV or a vector containing Bcl-xL cDNA, treated with increasing concentrations of CPI-613, labeled with Annexin V/PI dye, and analyzed by flow cytometry (n = 2 per group). (D and E) KNS42 cells were transfected with nontargeting siRNA (siNT) or siRNAs against Noxa. Transfected cells were treated with CPI-613 and cellular viability analysis was performed (D, n = 4 per group), and flow cytometry following labeling with Annexin V/PI was performed (E, n = 3 per group). Statistical significance was assessed by 2-tailed Student’s t test (B, D, and E). Data are shown as mean ± SD. *P < 0.05, **P < 0.01, ****P < 0.001.

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