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Biallelic variants in FLII cause pediatric cardiomyopathy by disrupting cardiomyocyte cell adhesion and myofibril organization
Claudine W.B. Ruijmbeek, Filomena Housley, Hafiza Idrees, Michael P. Housley, Jenny Pestel, Leonie Keller, Jason K.H. Lai, Herma C. van der Linde, Rob Willemsen, Janett Piesker, Zuhair N. Al-Hassnan, Abdulrahman Almesned, Michiel Dalinghaus, Lisa M. van den Bersselaar, Marjon A. van Slegtenhorst, Federico Tessadori, Jeroen Bakkers, Tjakko J. van Ham, Didier Y.R. Stainier, Judith M.A. Verhagen, Sven Reischauer
Claudine W.B. Ruijmbeek, Filomena Housley, Hafiza Idrees, Michael P. Housley, Jenny Pestel, Leonie Keller, Jason K.H. Lai, Herma C. van der Linde, Rob Willemsen, Janett Piesker, Zuhair N. Al-Hassnan, Abdulrahman Almesned, Michiel Dalinghaus, Lisa M. van den Bersselaar, Marjon A. van Slegtenhorst, Federico Tessadori, Jeroen Bakkers, Tjakko J. van Ham, Didier Y.R. Stainier, Judith M.A. Verhagen, Sven Reischauer
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Research Article Cardiology Genetics

Biallelic variants in FLII cause pediatric cardiomyopathy by disrupting cardiomyocyte cell adhesion and myofibril organization

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Abstract

Pediatric cardiomyopathy (CM) represents a group of rare, severe disorders that affect the myocardium. To date, the etiology and mechanisms underlying pediatric CM are incompletely understood, hampering accurate diagnosis and individualized therapy development. Here, we identified biallelic variants in the highly conserved flightless-I (FLII) gene in 3 families with idiopathic, early-onset dilated CM. We demonstrated that patient-specific FLII variants, when brought into the zebrafish genome using CRISPR/Cas9 genome editing, resulted in the manifestation of key aspects of morphological and functional abnormalities of the heart, as observed in our patients. Importantly, using these genetic animal models, complemented with in-depth loss-of-function studies, we provided insights into the function of Flii during ventricular chamber morphogenesis in vivo, including myofibril organization and cardiomyocyte cell adhesion, as well as trabeculation. In addition, we identified Flii function to be important for the regulation of Notch and Hippo signaling, crucial pathways associated with cardiac morphogenesis and function. Taken together, our data provide experimental evidence for a role for FLII in the pathogenesis of pediatric CM and report biallelic variants as a genetic cause of pediatric CM.

Authors

Claudine W.B. Ruijmbeek, Filomena Housley, Hafiza Idrees, Michael P. Housley, Jenny Pestel, Leonie Keller, Jason K.H. Lai, Herma C. van der Linde, Rob Willemsen, Janett Piesker, Zuhair N. Al-Hassnan, Abdulrahman Almesned, Michiel Dalinghaus, Lisa M. van den Bersselaar, Marjon A. van Slegtenhorst, Federico Tessadori, Jeroen Bakkers, Tjakko J. van Ham, Didier Y.R. Stainier, Judith M.A. Verhagen, Sven Reischauer

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Figure 2

CRISPR/Cas9-mediated genome editing of patient-specific biallelic variants in flii in zebrafish results in DCM-associated phenotypes in early development.

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CRISPR/Cas9-mediated genome editing of patient-specific biallelic varian...
(A) Schematic representation of the FLII protein, consisting of a leucine-rich repeat (LRR) and 6 gelsolin-like domains. Location of the human variants of families 1 and 3 are depicted with corresponding variants generated in zebrafish (D. rerio). (B) Aligned Sanger sequencing traces of wild-type flii+/+ and genome-edited PCR amplicons from compound heterozygous fliiS449fs/R1158W larvae harboring a heterozygous variant resulting in a frameshift starting at amino acid position 449 (left panel, sequence is reverse complement as it was sequenced with the reverse primer) and the heterozygous R1158W missense variant (right panel), representing family 1. Modified codons are underlined in red. Dotted line represents intronic sequence. (C) Representative Sanger sequencing results of the PCR amplicons from wild-type and fliiR1230C/R1230C zebrafish larvae harboring the homozygous R1230C missense variant, representing family 3. The modified codon is underlined in red. (D) Ventricular kymographs derived from high-speed imaging video recordings of 120 hpf zebrafish larvae spanning approximately 2 seconds: flii+/+ (top panel), fliiS449fs/R1158W (middle panel) and fliiR1230C/R1230C (lower panel). Note that there are no signs of irregular heart rhythm in larvae harboring patient-specific biallelic variants. (E–G) Ventricular contractility parameters derived from high-speed imaging movies, including heart rate (E), fractional area change (F), and ejection fraction (G) for flii+/+, fliiS449fs/+, fliiR1158W/+, and fliiS449fs/R1158W. flii+/+ n = 14; fliiS449fs/+ n = 12; fliiR1158W/+ n = 9; fliiS449fs/R1158W n = 14. (H–J) Ventricular contractility parameters derived from high-speed imaging movies, including heart rate (H), fractional area change (I), and ejection fraction (J) for flii+/+, fliiR1230C/+, and fliiR1230C/R1230C. flii+/+ n = 9; fliiR1230C/+ n = 15; fliiR1230C/R1230C n = 12. Statistics: mean ± SD; 1-way ANOVA coupled with Tukey’s multiple-comparison test was used to test for significance.

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