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High-fat diet plus HNF1A variant promotes polyps by activating β-catenin in early-onset colorectal cancer
Heyu Song, Ricky A. Sontz, Matthew J. Vance, Julia M. Morris, Sulaiman Sheriff, Songli Zhu, Suzann Duan, Jiping Zeng, Erika Koeppe, Ritu Pandey, Curtis A. Thorne, Elena M. Stoffel, Juanita L. Merchant
Heyu Song, Ricky A. Sontz, Matthew J. Vance, Julia M. Morris, Sulaiman Sheriff, Songli Zhu, Suzann Duan, Jiping Zeng, Erika Koeppe, Ritu Pandey, Curtis A. Thorne, Elena M. Stoffel, Juanita L. Merchant
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Research Article Gastroenterology Genetics

High-fat diet plus HNF1A variant promotes polyps by activating β-catenin in early-onset colorectal cancer

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Abstract

The incidence of early-onset colorectal cancer (EO-CRC) is rising and is poorly understood. Lifestyle factors and altered genetic background possibly contribute. Here, we performed targeted exon sequencing of archived leukocyte DNA from 158 EO-CRC participants, which identified a missense mutation at p.A98V within the proximal DNA binding domain of Hepatic Nuclear Factor 1 α (HNF1AA98V, rs1800574). The HNF1AA98V exhibited reduced DNA binding. To test function, the HNF1A variant was introduced into the mouse genome by CRISPR/Cas9, and the mice were placed on either a high-fat diet (HFD) or high-sugar diet (HSD). Only 1% of the HNF1A mutant mice developed polyps on normal chow; however, 19% and 3% developed polyps on the HFD and HSD, respectively. RNA-Seq revealed an increase in metabolic, immune, lipid biogenesis genes, and Wnt/β-catenin signaling components in the HNF1A mutant relative to the WT mice. Mouse polyps and colon cancers from participants carrying the HNF1AA98V variant exhibited reduced CDX2 and elevated β-catenin proteins. We further demonstrated decreased occupancy of HNF1AA98V at the Cdx2 locus and reduced Cdx2 promoter activity compared with WT HNF1A. Collectively, our study shows that the HNF1AA98V variant plus a HFD promotes the formation of colonic polyps by activating β-catenin via decreasing Cdx2 expression.

Authors

Heyu Song, Ricky A. Sontz, Matthew J. Vance, Julia M. Morris, Sulaiman Sheriff, Songli Zhu, Suzann Duan, Jiping Zeng, Erika Koeppe, Ritu Pandey, Curtis A. Thorne, Elena M. Stoffel, Juanita L. Merchant

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Figure 1

HNF1AA98V was identified in EO-CRC and demonstrated reduced DNA binding affinity and avidity.

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HNF1AA98V was identified in EO-CRC and demonstrated reduced DNA binding ...
(A) Flow diagram of exon sequencing cancer gene panel from Qiagen of leukocytes from participants at the University of Michigan (UM) GI Genetics Clinic. (B) Location of HNF1A missense mutations identified in EO-CRC participants with 13 participants having a missense mutation at A98V located within the DNA binding domain. (C) Flag-tagged HNF1A and HNF1AA98V variant plasmids were transfected into HCT116 cells, followed by cellular fractionation. (D) The DNA binding of HNF1A and HNF1AA98V proteins was evaluated by EMSA. FLAG antibody was added to confirm protein identity by a supershift (red arrow). The unlabeled probe was added to the reaction at 2, 10, and 50 times the probe concentration. (E) The percentage of probe shifted per total probe added was plotted as a function of unlabeled probe for HNF1A and the A98V variant and showed lower avidity for the A98V variant. Five individual experiments were performed. Data represent mean ± SEM. 2-way ANOVA, ****P < 0.0001.

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