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CLUH functions as a negative regulator of inflammation in human macrophages and determines ulcerative colitis pathogenesis
Shaziya Khan, Desh Raj, Shikha Sahu, Anam Naseer, Nishakumari C. Singh, Sunaina Kumari, Sharmeen Ishteyaque, Jyotsna Sharma, Promila Lakra, Madhav N. Mugale, Arun Kumar Trivedi, Mrigank Srivastava, Tulika Chandra, Vivek Bhosale, Manoj Kumar Barthwal, Shashi Kumar Gupta, Kalyan Mitra, Aamir Nazir, Uday C. Ghoshal, Amit Lahiri
Shaziya Khan, Desh Raj, Shikha Sahu, Anam Naseer, Nishakumari C. Singh, Sunaina Kumari, Sharmeen Ishteyaque, Jyotsna Sharma, Promila Lakra, Madhav N. Mugale, Arun Kumar Trivedi, Mrigank Srivastava, Tulika Chandra, Vivek Bhosale, Manoj Kumar Barthwal, Shashi Kumar Gupta, Kalyan Mitra, Aamir Nazir, Uday C. Ghoshal, Amit Lahiri
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Research Article Gastroenterology

CLUH functions as a negative regulator of inflammation in human macrophages and determines ulcerative colitis pathogenesis

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Abstract

Altered mitochondrial function without a well-defined cause has been documented in patients with ulcerative colitis (UC). In our efforts to understand UC pathogenesis, we observed reduced expression of clustered mitochondrial homolog (CLUH) only in the active UC tissues compared with the unaffected areas from the same patient and healthy controls. Stimulation with bacterial Toll-like receptor (TLR) ligands similarly reduced CLUH expression in human primary macrophages. Further, CLUH negatively regulated secretion of proinflammatory cytokines IL-6 and TNF-α and rendered a proinflammatory niche in TLR ligand–stimulated macrophages. CLUH was further found to bind to mitochondrial fission protein dynamin related protein 1 (DRP1) and regulated DRP1 transcription in human macrophages. In the TLR ligand–stimulated macrophages, absence of CLUH led to enhanced DRP1 availability for mitochondrial fission, and a smaller dysfunctional mitochondrial pool was observed. Mechanistically, this fissioned mitochondrial pool in turn enhanced mitochondrial ROS production and reduced mitophagy and lysosomal function in CLUH-knockout macrophages. Remarkably, our studies in the mouse model of colitis with CLUH knockdown displayed exacerbated disease pathology. Taken together, this is the first report to our knowledge explaining the role of CLUH in UC pathogenesis, by means of regulating inflammation via maintaining mitochondrial-lysosomal functions in the human macrophages and intestinal mucosa.

Authors

Shaziya Khan, Desh Raj, Shikha Sahu, Anam Naseer, Nishakumari C. Singh, Sunaina Kumari, Sharmeen Ishteyaque, Jyotsna Sharma, Promila Lakra, Madhav N. Mugale, Arun Kumar Trivedi, Mrigank Srivastava, Tulika Chandra, Vivek Bhosale, Manoj Kumar Barthwal, Shashi Kumar Gupta, Kalyan Mitra, Aamir Nazir, Uday C. Ghoshal, Amit Lahiri

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Figure 9

LPS-induced CLUH degradation is mediated via sumoylation/ubiquitination at residue Lys1257.

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LPS-induced CLUH degradation is mediated via sumoylation/ubiquitination ...
(A) Confirmation of CRISPR-mediated CLUH knockout in THP1 cells by Western blot in which GAPDH is used as loading control (2 of 6 technical replicates shown) along with summary graph of densitometry from 6 replicates. (B) WT THP1 cells were pretreated with proteasome inhibitor (MG132, 50 μM) for 6 hours and treated with 200 ng/mL LPS for 6 hours. CLUH protein level was checked by Western blot in which GAPDH is used as loading control (1 of 3 replicates shown) along with summary graph of densitometry from 3 replicates. (C) THP1 CLUH-knockout (CLUH-KO) cells were transfected with CLUH full length (FL) or CLUH S279,281A; CLUH K-12; and CLUH K1257 mutants (pEGFP-N1 vector) and Western blot for CLUH expression GAPDH as a loading control in 1 of 3 replicates, along with summary graph of densitometry from 3 replicates. WT THP1 cells are used as control. (D) THP1 CLUH-KO cells were transfected with CLUH FL or CLUH S279,281A; CLUH K-12; and CLUH K1257 mutants and treated with 200 ng/mL LPS for 6 hours. Western blot for CLUH expression using GAPDH as a loading control in 1 of 4 replicates. Densitometry values are indicated above the band. (E) IL-6 production from the supernatants (8 replicates from each group) from THP1 CLUH-KO cells after transfection with CLUH FL or CLUH K1257 mutants and treated with 200 ng/mL LPS for 24 hours. WT THP1 cells are used as control. Mean ± SEM; *P < 0.05; **P < 0.01; ***P < 0.001; ****P < 0.0001 as determined by 2-tailed t test (A) and 1-way ANOVA for the rest. “EV” denotes empty vector.

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