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Deficiency of histone lysine methyltransferase SETDB2 in hematopoietic cells promotes vascular inflammation and accelerates atherosclerosis
Xinbo Zhang, Jonathan Sun, Alberto Canfrán-Duque, Binod Aryal, George Tellides, Ying Ju Chang, Yajaira Suárez, Timothy F. Osborne, Carlos Fernández-Hernando
Xinbo Zhang, Jonathan Sun, Alberto Canfrán-Duque, Binod Aryal, George Tellides, Ying Ju Chang, Yajaira Suárez, Timothy F. Osborne, Carlos Fernández-Hernando
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Research Article Inflammation Vascular biology

Deficiency of histone lysine methyltransferase SETDB2 in hematopoietic cells promotes vascular inflammation and accelerates atherosclerosis

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Abstract

Epigenetic modifications of the genome, including DNA methylation, histone methylation/acetylation, and noncoding RNAs, have been reported to play a fundamental role in regulating immune response during the progression of atherosclerosis. SETDB2 is a member of the KMT1 family of lysine methyltransferases, and members of this family typically methylate histone H3 Lys9 (H3K9), an epigenetic mark associated with gene silencing. Previous studies have shown that SETDB2 is involved in innate and adaptive immunity, the proinflammatory response, and hepatic lipid metabolism. Here, we report that expression of SETDB2 is markedly upregulated in human and murine atherosclerotic lesions. Upregulation of SETDB2 was observed in proinflammatory M1 but not antiinflammatory M2 macrophages. Notably, we found that genetic deletion of SETDB2 in hematopoietic cells promoted vascular inflammation and enhanced the progression of atherosclerosis in BM transfer studies in Ldlr-knockout mice. Single-cell RNA-Seq analysis in isolated CD45+ cells from atherosclerotic plaques from mice transplanted with SETDB2-deficient BM revealed a significant increase in monocyte population and enhanced expression of genes involved in inflammation and myeloid cell recruitment. Additionally, we found that loss of SETDB2 in hematopoietic cells was associated with macrophage accumulation in atherosclerotic lesions and attenuated efferocytosis. Overall, these studies identify SETDB2 as an important inflammatory cell regulator that controls macrophage activation in atherosclerotic plaques.

Authors

Xinbo Zhang, Jonathan Sun, Alberto Canfrán-Duque, Binod Aryal, George Tellides, Ying Ju Chang, Yajaira Suárez, Timothy F. Osborne, Carlos Fernández-Hernando

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Figure 5

Macrophage Setdb2 deficiency enhances inflammatory response and impairs macrophage efferocytosis.

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Macrophage Setdb2 deficiency enhances inflammatory response and impairs ...
(A) qRT-PCR analysis of LPS-induced (100 ng/ml for 4 hours) expression of Ccl2, IL-6, and IL-10 in BMDMs isolated from WT or Setdb2GT mice (n = 4 per group). Data were analyzed by 1-way ANOVA and Tukey’s post hoc test. (B) Analysis of plasma Il1b and Tnfa levels from Ldlr–/– mice transplanted with WT or Setdb2GT BM and fed a Western diet for 14 weeks (n = 5–7). Data were analyzed by an unpaired 2-tailed Student’s t test. (C) Representative images (left) of the in vitro engulfment of CellTracker Red–labeled apoptotic Jurkat cells (AC) by BM-derived macrophages (BMDMs) isolated from WT or Setdb2GT mice. Quantification is shown (n = 3 each group). Phagocytosis is expressed with the phagocytic index, which is the number of apoptotic cells (red) ingested in 1 hour per CD68+ macrophage (green) × 100 of apoptotic Jurkat T cells. Data were analyzed by an unpaired 2-tailed Student’s t test (n = 3 each group). (D) Western blot analysis of MerTK in BMDMs from WT and Setdb2GT mice. HSP90 was used as a loading control. *P < 0.05, ****P < 0.0001 compared with WT BMDM or Ldlr–/– mice transplanted with WT BM.

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