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eIF4A inhibition circumvents uncontrolled DNA replication mediated by 4E-BP1 loss in pancreatic cancer
David Müller, Sauyeun Shin, Théo Goullet de Rugy, Rémi Samain, Romain Baer, Manon Strehaiano, Laia Masvidal-Sanz, Julie Guillermet-Guibert, Christine Jean, Yoshinori Tsukumo, Nahum Sonenberg, Frédéric Marion, Nicolas Guilbaud, Jean-Sébastien Hoffmann, Ola Larsson, Corinne Bousquet, Stéphane Pyronnet, Yvan Martineau
David Müller, Sauyeun Shin, Théo Goullet de Rugy, Rémi Samain, Romain Baer, Manon Strehaiano, Laia Masvidal-Sanz, Julie Guillermet-Guibert, Christine Jean, Yoshinori Tsukumo, Nahum Sonenberg, Frédéric Marion, Nicolas Guilbaud, Jean-Sébastien Hoffmann, Ola Larsson, Corinne Bousquet, Stéphane Pyronnet, Yvan Martineau
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Research Article Gastroenterology Oncology

eIF4A inhibition circumvents uncontrolled DNA replication mediated by 4E-BP1 loss in pancreatic cancer

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Abstract

Pancreatic ductal adenocarcinoma (PDAC) relies on hyperactivated protein synthesis. Consistently, human and mouse PDAC lose expression of the translational repressor and mTOR target 4E-BP1. Using genome-wide polysome profiling, we here explore mRNAs whose translational efficiencies depend on the mTOR/4E-BP1 axis in pancreatic cancer cells. We identified a functional enrichment for mRNAs encoding DNA replication and repair proteins, including RRM2 and CDC6. Consequently, 4E-BP1 depletion favors DNA repair and renders DNA replication insensitive to mTOR inhibitors, in correlation with a sustained protein expression of CDC6 and RRM2, which is inversely correlated with 4E-BP1 expression in PDAC patient samples. DNA damage and pancreatic lesions induced by an experimental pancreatitis model uncover that 4E-BP1/2–deleted mice display an increased acinar cell proliferation and a better recovery than WT animals. Targeting translation, independently of 4E-BP1 status, using eIF4A RNA helicase inhibitors (silvestrol derivatives) selectively modulates translation and limits CDC6 expression and DNA replication, leading to reduced PDAC tumor growth. In summary, 4E-BP1 expression loss during PDAC development induces selective changes in translation of mRNA encoding DNA replication and repair protein. Importantly, targeting protein synthesis by eIF4A inhibitors circumvents PDAC resistance to mTOR inhibition.

Authors

David Müller, Sauyeun Shin, Théo Goullet de Rugy, Rémi Samain, Romain Baer, Manon Strehaiano, Laia Masvidal-Sanz, Julie Guillermet-Guibert, Christine Jean, Yoshinori Tsukumo, Nahum Sonenberg, Frédéric Marion, Nicolas Guilbaud, Jean-Sébastien Hoffmann, Ola Larsson, Corinne Bousquet, Stéphane Pyronnet, Yvan Martineau

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Figure 5

Targeting the eIF4F complex efficiently blocks mRNA translation in pancreatic cancer cells independently of the mTOR/4E-BP1 axis.

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Targeting the eIF4F complex efficiently blocks mRNA translation in pancr...
(A) Cell proliferation assays of shScramble or sh4E-BP1 MiaPaca-2 cells. Data are presented as mean ± SD (n = 3). Survival is shown as compared with DMSO controls. (B and C) shScramble or sh4E-BP1 MiaPaca-2 cells were treated 1 hour with indicated drug concentrations. Representative dot blot result obtained from treated cells is depicted. (B) CHX is used as a negative control for puromycin incorporation. GAPDH is used as a loading control. (C) Representative curves of translation rate as a function of drug concentration (2 independent experiments). (D and E) Polysome profiles of shScramble or sh4E-BP1 MiaPaca-2 cells incubated with vehicle, 2.5 μM PP242, or 50 nM EC143.29 and EC143.69 for 3 hours. Absorbance at 254 nm is shown as a function of sedimentation (n = 2). (F) Western blot analysis of indicated proteins from whole cell lysate or (G) cap-bound complex from shScr or sh4E-BP1 MiaPaca-2 cells treated with vehicle or PP242 (2.5 μM), Torin1 (500 nM), EC143.29 (50 nM), EC143.69 (50 nM), cycloheximide (CHX, 100 μg/ml) for 3 hours. Two independent experiments. Respectively, α, β, and γ indicate hypo-, partially, and hyperphosphorylated forms of 4E-BP1.

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